F29904

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F29904

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F29904

Determination of introduced cDNA(s)

  • RAFL05-17-C10 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL05-17-C10 - Resource: pda07375

    full reading [+] show sequence

    Nucleotide sequence: RAFL05-17-C10 - full reading 
    TGAGACACTC GCTTGCGTGT CTCCCTCTCT TAAACTCTCT CTTTCTCTTT 
    CTCTTTTGGT TTCTGGGTTA TTTCAAAGAA AAGAATCAAG AAACCCCTCT 
    TTCTCTCTTA CAAGAATCCC ATCATGGTGT TTGGAAAAGG GTCAAACCTT 
    GACAGATTCC TTCATTGCAC AACACCTGTA GTGCCACCCC AATCTCTATC 
    CAAGGCGGAG ATTAGGAGTT TGAATAGGAT TTGGCATCCA TGGGAGAGAC 
    AAAAGGTTGA GTTTTTCAGA TTGAGTGATC TATGGGATTG TTATGATGAA 
    TGGAGTGCTT ATGGAGCTGG TGTTCCAATT CGTCTCTCTA ATGGAGAATC 
    TCTTGTTCAA TATTATGTTC CCTATCTCTC TGCTATTCAG ATTTTCACCT 
    CTCGTTCTTC CTTGATCCGC TTAAGGGATG ATTCTGAAGA TGGGGAAAGC 
    AGAGATTCGT TTAGTGATTC ATATAGTGAT GAGAGTGAAA GTGATAAACT 
    TTCGAGATGT GCTTCTGATG AAGGACTTGA ACATGACGCT CTCTTGCATC 
    CTAATGATCG GTTGGGATAT CTTTATCTGC AATACTTTGA GAGATCAGCT 
    CCTTATGCTC GAGTTCCTCT CATGGATAAG ATCAATGAAT TGGCTCAAAG 
    GTACCCGGGA CTAATGTCGT TGCGAAGCGT AGATCTTTCC CCGGCAAGTT 
    GGATGGCGGT AGCGTGGTAC CCTATTTACC ATATTCCAAT GGGAAGGACC 
    ATCAAAGATT TGTCCACTTG TTTCCTCACT TATCACACTC TTTCATCTTC 
    TTTCCAAGAT ATGGAGCCAG AAGAAAATGG CGGGGAAAAG GAGAGGATCC 
    GGAAGGAAGG AGAAGGTGTA ACTTTGCTTC CTTTTGGGTT AGCCACTTAT 
    AAGATGCAAG GCAATGTTTG GCTCTCGGAA GACGATCAAG GTCAAGATCA 
    AGAGCGAGTT CTTTCGCTTC TAAGTGTTGC GGATTCTTGG CTAAAACAGC 
    TAAGAGTCCA ACACCATGAC TTCAACTACT TCTCAAGAAT GGCTCACCGT 
    GGCTGAAACA AATCCGTTGC TATATACTGA TGAGTTCAAA TGTAGATTTT 
    GTATCTCTTT TTGTTTTTCT TGTTGGTCTC AAGTGGCAAG GAGATTACTT 
    TTTTCCCTGG TCGCAATATA CCGTGTTTGT CCAGTGGTTG GAGTAGCAGT 
    GGCAGCCGTG AAGAGGACTG AGCGTTTCCT TAACACACAA GTACAGCGGT 
    TTCAACGTTT TGGGTGTAGA ATAGCTTTAA AGTAGCATCA ATGGGAGATG 
    TCATATATTA TAAGTGCTGA TTTGTTGAAA AGAGTGGTTT CTTGTTTCTT 
    GATAAACATT GATTGAGAGG GTCTTGTTCT TGTACCTCAG TAATACTTTA 
    AAGGAGTAGC AAGTGTAACA ATCTCATCAT ATTTGTAACT GTTTTTACCC 
    AAATACATAA ATCAAAGCTG ATGATTTTTG TGTGTTTT

    Gene models with high sequence identity

    1. AT4G03420.1 [+] show detail - Protein of unknown function (DUF789)
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G03420.1

    Model type
    Protein coding
    Short Description
    Protein of unknown function (DUF789)
    Computational Description
    Protein of unknown function (DUF789); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF789 (InterPro:IPR008507); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF789) (TAIR:AT1G03610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR