F30207

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F30207

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F30207

Determination of introduced cDNA(s)

  • RAFL06-12-L22 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-12-L22 - Resource: pda07557

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-12-L22 - full reading 
    AGAAGAAGAA GAAAGGGAGA GTCTTGTGAT ATCTACGTAG AAGGAAGATG 
    GCCTTATCTC AAGTGTCTGC GTCTCTCGCC TTTTCTCTTC CCAATTCTGG 
    TGCCCTAAAG CTAGCCACAA TCACAAACCC AACTTCTACA TGTCGGGTTC 
    ATGTTCCGCA ACTTGCTGGA ATCCGATCCA CCTTCGCTTC TGGTTCTCCT 
    CTCTTGCCAT TGAAGTTGAG TATGACCCGT AGAGGAGGAA ACAGAGCAGC 
    ATCAGTTTCC ATAAGAAGTG AGCAAAGTAC AGAAGGAAGC AGTGGTTTGG 
    ATATATGGCT TGGTCGTGGC GCCATGGTTG GTTTTGCAGT TGCCATTACT 
    GTTGAGATTT CCACTGGAAA AGGACTTCTT GAGAATTTTG GAGTAGCAAG 
    TCCATTGCCT ACGGTTGCTT TAGCTGTTAC AGCATTGGTT GGTGTTCTAG 
    CTGCGGTTTT CATCTTCCAA TCTTCTTCTA AAAACTGATC GACAAGAATC 
    TTGTTTTGTG ATGCTGCCGA GGATCATTTT CTTGTATTAA GAATCTTGTA 
    TTATATATCA CTGTAACTTC TACATCC

    Gene models with high sequence identity

    1. AT4G34190.1 [+] show detail - stress enhanced protein 1
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT4G34190.1

    Model type
    Protein coding
    Short Description
    stress enhanced protein 1
    Curator Summary
    Encodes a stress enhanced protein that localizes to the thylakoid membrane and whose mRNA is upregulated in response to high light intensity. It may be involved in chlorophyll binding.
    Computational Description
    stress enhanced protein 1 (SEP1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR