F30241

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F30241

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F30241

Determination of introduced cDNA(s)

  • RAFL06-81-B20 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL06-81-B20 - Resource: pda03796

    full reading [+] show sequence

    Nucleotide sequence: RAFL06-81-B20 - full reading 
    ACCACTCAAA TCTCTTCACC TTGGCACCAT CTATAAATAT CCTCAAACAT 
    TAGCCTCTTT AAGAAATCAA TTCCAACCTT TTAAAGATTA ATCTTGAAAA 
    GTTTCTAATA AAAGGAAGAG AAGTGATCAG GTGTGGTGAC GAGTAGGATA 
    TGAAATTCTT GTTGGAACTC GTCGTGCCTT GTTTTGGTTC ACAACAGTTC 
    CAAGAATCCG CCGCAAGTAC TGCGGATGAT TCGGTTTCTG ACGAAACACA 
    AACGCTGATG AAACAACGGA GGCGACGGAA ACGCGTTAGA GTGGCTGGTC 
    AACCTGGACA AGTGGCAGAG TGGAGACCGT CTCTTAGCGT TATCTCCGAG 
    AACAAGCCGG CGATAACGAA GATATCAGAA AAGAACGAAG AAAAGAAGAA 
    AGTCCGTCGG AAAAGTGAAG GCAACGGCGG CGGAGACGCA TCATCACGGT 
    CCGGTGGTGG TCATATTCGT TTCCGTAGTG ACGATTTCGG GAGAAATGCT 
    TTCGAACCGG TGATTCCGGC ATTCTCGCCG ACTCCGTTCA TGTTTTGAGT 
    TTAAGTTTCT GGTGAAGTTT ATGTGTATAA TATATTGATA AATATGTTAT 
    TGTTAATGGA AAGATGTAGC ATTAATGTAT ATACTTCTTT GATTTTACTA 
    CAAAAAAAAA AAAAAAA

    Gene models with high sequence identity

    1. AT5G54585.1 [+] show detail - unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    See the detailed result >

    AT5G54585.1

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR