F30427

RIKEN Arabidopsis full-length cDNA overexpressed Arabidopsis lines

Original: F30427

Phenotypes

Morphological phenotypes

Specific phenotypess were NOT observed.

Invisible phenotypes

Specific phenotypes were NOT observed.

Original: F30427

Determination of introduced cDNA(s)

  • RAFL09-89-M16 - RIKEN Arabidopsis Full-length cDNAs - Original: RAFL09-89-M16 - Resource: pda06941

    full reading [+] show sequence

    Nucleotide sequence: RAFL09-89-M16 - full reading 
    GCTTTTGCCG GCGTCGGATC TCGGCAAAGT CTCCTCCGTA GAAATTATCT 
    ATCTGTTGTG GAACTGAAAT CGCTGGATTT TGGGGTTTTC TGGTAAGAGG 
    GTCTCCAGGA TGAATCCGGC GAATTTTCAG CCTCCAAATC CTCCGTTCCA 
    CTGGGCTCCG ATGTTACCTC CAGACCCGCC TCGTTGTGGT ATGTTTTGGA 
    ATACAAAGAA CATAACCGAT CAGCTTAAAC AACTTCAAGA TACGCTTAAC 
    CTGGCTAAAT CAATGGAGAA AGAACTGGAA GCATTGAAGA TGATCAAAGA 
    CGCCAAAGGT TCTGTGGAAA ATGCAGTACA AGATTCGGGA GTAGAGTATT 
    TAGAGGCTAG AAAGATGGAT TTGGGACAGC AGGAAATGCT TTCAGTGGAT 
    GCTGCTAACT CCTTGATGTC TACCTTGAGA GCACAGCTTG AGCCTTTTAG 
    GTTCGTTGTT GATGAGAATA GTCCATGGGA AGAGAAATCT GCAGCAGTAA 
    GATTGACTTG CAAAATGAAG AAATCAATAA GGAACAAACT GTGGAAGAAA 
    CGAAAGAGAC GGTGTGCTGC AGAGATGCGT GCTAAGGAGC CTGAAAGATT 
    TGAACAAGCT GATCGAGAGG CAGATGAATG GAGGGAAAAG GAAATGGCCA 
    AGGACATGGC AAATAGAAAG GTTGATGAGA TGAAGGCAAT TGAGAAGATC 
    AAGGCAAAAC GTGAGCGAAA GAGACTAGAA CCCGAGCTTG AACTAGCTCT 
    GATTGTTGAG GAAATGCAAG AGTTACGTTC CCTAAGAATT GAAAAACTAA 
    AGAAGCAAGG ACATTTCCTT CCCGAAGAAG ATGACAAGTT TTTCGAGAGT 
    GTTCGTGCTG CAGTGGAGCA AGAGGAAAAC CAAGCTCAGT CCCTAATCAA 
    CACAGAGACC GAAGAGCATG TCATTGCCTC TGAGGAGAAC ACTACTCTCA 
    CTACCAGTAA CAAAACCAAC AACGACACAG ATAAAGATAG CAATACTAAT 
    GCAGCTTCTT GTGAAAGGAC TATGAAAGCT CCTGACAATG GTTGCGACAA 
    TATATCGAAT TTACCAGTCG AGGTCTATCA CTACTACTAC GGAAGTAATA 
    TCGACATGGG TAGACTTATT GAGATCAGAA GAGAATGGGA TGCATATCTG 
    AGTGCCGGAG GAAGCCGGAT TCCTGGACAC TGGGTCCAGC CGTCGCCACC 
    AGCTAATGAG ATTTGGGCTT CTTGTCTTGT TAATACTCCC AAAAGAGATC 
    TTAGTTAGTC GCTGTTAGGA TTCTAGGATA CTGGTTTCAT GCAACACCCT 
    TTACTCAAGA TTATGCGATT TGGTCATTTG CCTCTGTTTT GAAACAGAAA 
    CAGATCACAA GTTTAATAAT CAAGAACAGA ACAAGTCTTT AGCGATATCT 
    TAATCCTCGA TGACAACGTC ATTGTAGAAC CAATTCTTAC CACTGGAATT 
    CGTGTTTCAC AAGAAAAAAA AAAAAAAA

    Gene models with high sequence identity

    1. AT2G46200.1 [+] show detail - unknown protein; Has 2968 Blast hits to 2381 proteins in 310 species: Archae - 16; Bacteria - 188...
      E-value: 0; Score: 100.00

     

    InterPro Scan Digest

    Program Description E-value
    Coil coiled-coil 0
    Coil coiled-coil 0

    See the detailed result >

    AT2G46200.1

    Model type
    Protein coding
    Computational Description
    unknown protein; Has 2968 Blast hits to 2381 proteins in 310 species: Archae - 16; Bacteria - 188; Metazoa - 1070; Fungi - 227; Plants - 145; Viruses - 4; Other Eukaryotes - 1318 (source: NCBI BLink).
    Link
    InterPro Scan - TAIR